Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., DEAD/DEAH box helicase family protein from Variovorax sp. OAS795

 Score =  100 bits (249), Expect = 1e-25
 Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 62/390 (15%)

Query: 27  VIVLPTGAGKS---LVIAELARLARGRVLVLAHVKELVEQNHAKYEGYGLTG-AIFSAGL 82
           +++ PTGAGK+   L IA+ A     R   L     L++Q   +   YGL    +     
Sbjct: 9   MLMAPTGAGKTYLGLRIAQKALKQGKRATFLCDRITLIDQTCKRAFEYGLGDHGVIQGDH 68

Query: 83  GRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHRVPDDKNSSYQKVITHLLELNPG 142
            R++  ++   ASVQ++    S       +L++DE H   D       K           
Sbjct: 69  FRQDWSKRFQIASVQTIE---SRGWPDTDVLIVDEAHTQRDTWVDYAMK---------SA 116

Query: 143 MKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCIFELPIHYLLDEGFLTPAQLID 202
            +V+GL+ATP+  G+G                + F + +    +H L + G L P +++ 
Sbjct: 117 ARVIGLSATPFSKGLG----------------KVFTNLVSPTTMHALTESGVLVPMRVLS 160

Query: 203 TPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQIVAQIIELAKARQGVMIFAATVR 262
                 D +  K  + G ++ +E     E+       +VA+ +  A+ R+ + +F AT+ 
Sbjct: 161 C--RRPDMAGAKTNSFGEWQPAEAS---ERGMEIIGDVVAEWLRHAENRKTI-VFGATIA 214

Query: 263 HAEEIYRLLPTE--HAALVIGDTPTPERDRIIQAFKQ--QQIKFLVNVSVLTTGFDAPHV 318
           H EE+ R        +A    DT   ERD++I  F++    I+ L++V  L  GFD   V
Sbjct: 215 HCEELCRQFNEAGIFSATFTKDTDKRERDQLIAEFEKPDSSIRVLISVEALAKGFDVQDV 274

Query: 319 DLIAILRPT-ESVSLYQQIVGRGLRL--AAGKSDCLVLDYAGN----------------- 358
             +   RP  +S+S   Q+ GRGLR   A GK DCL+LD++GN                 
Sbjct: 275 GCVVDCRPLRKSLSTAIQMWGRGLRSSPATGKEDCLLLDHSGNITRFAEDYTRIFFNGLD 334

Query: 359 QYDLYQPEVGDPKPDSDSEIITIPCPACGF 388
             D+ +      +PD   E     CP C +
Sbjct: 335 SLDMGEALDKQIRPDGQEERERTGCPKCQY 364