Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score = 83.2 bits (204), Expect = 5e-20
 Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 36/361 (9%)

Query: 8   QADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIA-ELARLARGRVLVLAHVKELV---EQ 63
           Q +++ A+     Q  +  ++VL TG GK+ + A +  +    +VL +AH +E++   E+
Sbjct: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEK 281

Query: 64  NHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVR--NLSEFQ-NQFSLLVIDECHR 120
              +      TG         + T   ++FASV ++ +  +L  F  + F  +V+DE H 
Sbjct: 282 TFCQLIPNAKTGLYNGV---TQNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHH 338

Query: 121 VPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDC 180
                  SY+ ++T+     P   +LGLTATP R     I       LV           
Sbjct: 339 AAA---RSYRNLLTYF---KPKF-LLGLTATPERSDQADILSLCDSNLV----------- 380

Query: 181 IFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQI 240
            FE  + + +DE  L P         + ++ ++ P   G++    LD  +   +RA  + 
Sbjct: 381 -FERNLVHGIDEKILVPFDYHGIYDQAVNYQEI-PWRNGKFDPDSLDNALATQRRA--EH 436

Query: 241 VAQIIELAKARQGVMIFAATVRHAEEIYRL-LPTEHAALVIGDTPTPERDRIIQAFKQQQ 299
           V Q     K  +  + F  + +HA+ +    L     A+ +       R++ +Q     +
Sbjct: 437 VYQHWHQKKQTR-TLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDSGK 495

Query: 300 IKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLR--LAAGKSDCLVLDYAG 357
           I  L +V +   G D P +D I +LRPTES  L+ Q +GRGLR  +   KS  +V+D+ G
Sbjct: 496 IDILFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIG 555

Query: 358 N 358
           N
Sbjct: 556 N 556