Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., DEAD/DEAH box helicase family protein from Pectobacterium carotovorum WPP14

 Score =  693 bits (1789), Expect = 0.0
 Identities = 340/572 (59%), Positives = 427/572 (74%), Gaps = 2/572 (0%)

Query: 2   YTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELV 61
           +TLRPYQ ++V A + YFR+H+ PAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELV
Sbjct: 9   FTLRPYQREAVSATLDYFRRHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELV 68

Query: 62  EQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHRV 121
            QNHAKY    L   IF+AGL ++E+  +VVF SVQSV RNL +F N FSLL+IDECHR+
Sbjct: 69  AQNHAKYCALDLEADIFAAGLQQRESQGKVVFGSVQSVARNLDQFDNAFSLLIIDECHRI 128

Query: 122 PDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCI 181
            DD NS YQ++I HL + NP +++LGLTATPYRLG GWIYQYH  G++R +E   FRDCI
Sbjct: 129 SDDDNSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGMIRGDERSLFRDCI 188

Query: 182 FELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQIV 241
           +ELP+ Y++  GFL P   +D PV+ YDFS+L   + G + E++L+L +++ QR TP I+
Sbjct: 189 YELPLRYMIKHGFLVPPDRLDMPVVQYDFSKLVARSNGLFSEADLNLELKRQQRITPHII 248

Query: 242 AQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQIK 301
           +Q+I+ A+ R+GVMIFA+TV HA+EI  LLP   AALV  DTP  ERD +I AFKQQ ++
Sbjct: 249 SQVIDYAQTRRGVMIFASTVEHAKEITALLPAGQAALVSADTPAAERDALINAFKQQSLR 308

Query: 302 FLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQYD 361
           +LVNV+VLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRL  GK+DCL+LDYAGN +D
Sbjct: 309 YLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLYQGKTDCLILDYAGNPHD 368

Query: 362 LYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDDETGE 421
           LY PEVG+ KP + S+ + + CP CGF N FWGK   +G +IEHYGRRCQG+    E+G+
Sbjct: 369 LYTPEVGNSKPHAGSQPVQVFCPECGFANLFWGKTTPDGDIIEHYGRRCQGW-EMAESGQ 427

Query: 422 REHCGYRFRAKYCNECGADNDIAARICHECDTTLVDPDKKLKEALNLKDALVFECTDMSL 481
           R+ C +RFR K C  CGA+NDIAAR CH+CD  LVDPD  LK AL LKDALV  C+ MS 
Sbjct: 428 RQQCDFRFRFKVCPHCGAENDIAARRCHQCDEVLVDPDDMLKAALKLKDALVLRCSGMSF 487

Query: 482 KVHKDAKGKSQLQVTYHGQDAVQVHQFWPLNTPRQKQQFHDQFVRPHLADKHRPFEAATP 541
           +  +DAKG+  L++TYH ++  +V + + L+T  Q+  F  QF+R H      PF     
Sbjct: 488 EQGQDAKGE-WLKITYHDEEGAEVSERFRLHTTAQRHVFLQQFLRVHQRAPGTPFSWHNA 546

Query: 542 AKVVDHQHRFRPPLFVIARKSGRFWTIRDKVF 573
           A V+  Q   R P FV+ARK G+FW IR+K+F
Sbjct: 547 ADVIAQQLLLRAPDFVVARKHGKFWQIREKLF 578