Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., DNA helicase from Magnetospirillum magneticum AMB-1

 Score =  236 bits (602), Expect = 2e-66
 Identities = 145/400 (36%), Positives = 223/400 (55%), Gaps = 30/400 (7%)

Query: 1   MYTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAE-----LARLARGRVLVLA 55
           M TLRPYQ  ++ A+  YF + S   +IV+PT  GK+LV++      L      R+LV+ 
Sbjct: 1   MLTLRPYQQAALTAIYDYFGRKSGHPLIVIPTAGGKALVLSAFIKEVLENWPDQRILVVT 60

Query: 56  HVKELVEQNHAKYEGY--GLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLL 113
           HV+EL+ QN+A+  G        I+SAGLG+++   +++FA +QS+ +   + Q Q  L+
Sbjct: 61  HVRELIAQNYAELIGLWPDAPAGIYSAGLGKRDLGARILFAGIQSIHKRAYDIQ-QCDLV 119

Query: 114 VIDECHRVPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEE 173
           +IDE H +P   ++ Y++ +  L  +NP +KV+G TATPYRL  G +++           
Sbjct: 120 LIDEAHLIPCASDTMYRRFLDTLARINPHLKVIGFTATPYRLDSGMLHE---------GG 170

Query: 174 PRFFRDCIFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQS 233
              F D  +E+ +  L+D GFL P  +  +     D + +  +  G +  S+L   +++ 
Sbjct: 171 GALFTDIAYEVSVRDLIDAGFLCPL-VSKSAATKLDVTGVG-SRGGEFIPSQLQAAVDKD 228

Query: 234 QRATPQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPTE--HAALVIGDTPTPERDRI 291
              T   + +++   + R+  + F + V HAE + + +       A + GDTP  ERDRI
Sbjct: 229 S-ITRAAIDEVVAYGQDRRSWLAFCSGVEHAEHVAQAIRDRGFSCATIFGDTPKGERDRI 287

Query: 292 IQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCL 351
           I AFK+ +I+ L ++ VLTTGF+AP VDLIA+LRPT+S  LY Q+ GRG RL+ GKS+CL
Sbjct: 288 IVAFKRGEIRALASMGVLTTGFNAPAVDLIAMLRPTKSAGLYVQMAGRGTRLSPGKSNCL 347

Query: 352 VLDYAGN-----QYDLYQPEVGDPKPDSDSEIITIPCPAC 386
           VLD+AGN       D   P         D E  T  CP C
Sbjct: 348 VLDFAGNVALHGPIDAVMPSA---PGKGDGEPPTKVCPGC 384