Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 97.1 bits (240), Expect = 2e-24
 Identities = 98/366 (26%), Positives = 165/366 (45%), Gaps = 54/366 (14%)

Query: 19  FRQHSTPAVIVLPTGAGKSLVIAELAR--LARG-RVLVLAHVKELVEQNHAKYEGYGLTG 75
           ++ H+T  ++  PTG+GK+ + A +    ++RG RV+     + L+ Q  +++  YGL+G
Sbjct: 21  WKSHNT-FMVYAPTGSGKTGLAAFIVDGFVSRGMRVMFCVPYQILITQTASRFIEYGLSG 79

Query: 76  AIFS---AGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHRVPDDKNSSYQKV 132
                  A         ++  AS  +++R   EF +   LL+IDE H          +++
Sbjct: 80  DEIGYVWASHPNHNPALKIQIASADTLIRR--EFPDNIDLLIIDEAHL-------RKKRI 130

Query: 133 ITHLLELNP-GMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCIFELPIHYLLD 191
           +  +  L   G+KV+GL+ TP+   +G                +++   I    I  L+ 
Sbjct: 131 LQDIERLRASGVKVIGLSGTPFSPFLG----------------KYYDRLIKPTTIGELIQ 174

Query: 192 EGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQI------VAQII 245
            G L+  +          ++  KP   G   +S L+   + ++    +I      V  I+
Sbjct: 175 RGDLSKYEF---------YAPTKPDLKGVKTKSSLEYGSDYNEAQLAEIMCGSTLVGDIV 225

Query: 246 E--LAKARQ-GVMIFAATVRHAE--EIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQI 300
           +  L   R    + F   V HA    I   L   +A ++  DTP  ER  II  F+    
Sbjct: 226 QNWLENGRDLPTIAFCVNVAHANYLTIQFNLAGINAEVMTADTPVDERQTIIHRFETGAT 285

Query: 301 KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQY 360
           K +V+V VL  GFD+  V  I   RPT+S   + Q +GRGLR A GK  CL+ D++G  +
Sbjct: 286 KIIVSVGVLVAGFDSD-VRCIIYARPTKSEIRWLQAIGRGLRTAPGKESCLIFDHSGTVH 344

Query: 361 DLYQPE 366
            L  P+
Sbjct: 345 RLGYPD 350