Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  707 bits (1824), Expect = 0.0
 Identities = 342/573 (59%), Positives = 435/573 (75%), Gaps = 2/573 (0%)

Query: 1   MYTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKEL 60
           ++TLRPYQ ++V A + +FR+H TPAVIVLPTGAGKSLVIAELAR+ARGRVLVLAHVKEL
Sbjct: 2   IFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKEL 61

Query: 61  VEQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHR 120
           V QNHAKY   GL   IF+AGL RKE+  +VVF SVQSV RNL  FQ +FSLL++DECHR
Sbjct: 62  VAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSVARNLDAFQEEFSLLIVDECHR 121

Query: 121 VPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDC 180
           + DD++S YQ+++THL ++NP +++LGLTATP+RLG GWIYQ+H  G+VR  +   FRDC
Sbjct: 122 IGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGNDNALFRDC 181

Query: 181 IFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQI 240
           I+ELP+ Y++  G+LTP + +D PV+ YDFS+L+  + G + E++L+  +++ QR TP I
Sbjct: 182 IYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHI 241

Query: 241 VAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQI 300
           ++QI+E A+ R+GVMIFAATV HA+EI  LLP + AAL+ GDTP PERD +I  FK Q+ 
Sbjct: 242 ISQIMEFAQTRKGVMIFAATVEHAKEIVGLLPADDAALITGDTPGPERDALIDNFKAQRF 301

Query: 301 KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQY 360
           ++LVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLA GK+DCL+LDYAGN +
Sbjct: 302 RYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPH 361

Query: 361 DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDDETG 420
           DLY PEVG PK  SD+  + + CPACGF N FWGK  A+G LIEH+GRRCQG+F DD+ G
Sbjct: 362 DLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDD-G 420

Query: 421 EREHCGYRFRAKYCNECGADNDIAARICHECDTTLVDPDKKLKEALNLKDALVFECTDMS 480
            RE C +RFR K C +C A+NDIAAR C ECD  LVDPD  LK AL LKDALV  C+ M+
Sbjct: 421 HREQCDFRFRFKNCPQCNAENDIAARRCRECDAILVDPDDMLKAALRLKDALVLRCSGMT 480

Query: 481 LKVHKDAKGKSQLQVTYHGQDAVQVHQFWPLNTPRQKQQFHDQFVRPHLADKHRPFEAAT 540
           ++  +D KG+  L++TY+ +D   V + + L+TP Q+  F   F+RPH      P    T
Sbjct: 481 MQHGQDEKGE-WLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWIT 539

Query: 541 PAKVVDHQHRFRPPLFVIARKSGRFWTIRDKVF 573
            A +V  Q   R P FV+AR  G++W +R+KVF
Sbjct: 540 AADIVAQQALLRHPDFVVARMKGQYWQVREKVF 572