Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., DEAD/DEAH box helicase from Erwinia tracheiphila SCR3

 Score =  664 bits (1712), Expect = 0.0
 Identities = 325/572 (56%), Positives = 423/572 (73%), Gaps = 3/572 (0%)

Query: 2   YTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELV 61
           +TLRPYQ ++V+A ++YFR+   PAVIVLPTGAGKSLVIAELA+ ARGRVLVLAHVKELV
Sbjct: 3   FTLRPYQHEAVEATLNYFRRSCAPAVIVLPTGAGKSLVIAELAKRARGRVLVLAHVKELV 62

Query: 62  EQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHRV 121
            QNH+KY+ YGL   IF+AGL R+E+  +VVFASVQSV RNL +F ++F+LL++DECHR+
Sbjct: 63  AQNHSKYQSYGLNADIFAAGLQRRESQSKVVFASVQSVARNLQQFDSEFTLLIVDECHRI 122

Query: 122 PDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCI 181
            D ++S YQ+++ +L   +P +++LGLTATPYRLG GWIYQ+H  G+VR +E   FRDCI
Sbjct: 123 SDAEDSQYQQILHYLRLRSPQLRLLGLTATPYRLGKGWIYQFHCHGMVRGDEHALFRDCI 182

Query: 182 FELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQIV 241
           +ELP+ Y++  GFL P + +D PV+ YDFS++     G + E++L+  ++Q +R TP I+
Sbjct: 183 YELPMRYMIKNGFLVPPERLDMPVVQYDFSRIAVKENGLFSEADLNHELKQQRRITPHII 242

Query: 242 AQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQIK 301
            QIIE A++RQGVMIFAATV HA E+  LLP ++ AL+   TP  ERD +I AFK +Q++
Sbjct: 243 RQIIEFAQSRQGVMIFAATVEHAREVAGLLPDDN-ALITAATPAVERDALIAAFKARQLR 301

Query: 302 FLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQYD 361
           +LVNV+VLTTGFDAPHVDLIAILRPTESVSLYQQI+GRGLRL  GK DCL+LDYAGN +D
Sbjct: 302 YLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIIGRGLRLCPGKRDCLILDYAGNPHD 361

Query: 362 LYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDDETGE 421
           ++ PEVG PK  SD++ + + CP CGF N FWGK  A+G LIEH+GRRC+G   ++  GE
Sbjct: 362 IFTPEVGTPKGKSDNQPVQVFCPCCGFANIFWGKTAADGTLIEHFGRRCKG-IIENSDGE 420

Query: 422 REHCGYRFRAKYCNECGADNDIAARICHECDTTLVDPDKKLKEALNLKDALVFECTDMSL 481
           R+ C YRFR K C  C A+NDIAAR CH+C+  LVDPD  LK AL LKDALV  C  M L
Sbjct: 421 RQQCYYRFRYKCCPHCLAENDIAARRCHQCEAVLVDPDDMLKAALKLKDALVLRCAAMEL 480

Query: 482 KVHKDAKGKSQLQVTYHGQDAVQVHQFWPLNTPRQKQQFHDQFVRPHLADKHRPFEAATP 541
           +   D KG+  L+  Y+ +DA +V++ + L+TP Q+  F   F+RPHL     P    + 
Sbjct: 481 ECGADQKGE-WLKARYYDEDATEVNERFRLSTPAQRTAFEQIFLRPHLRAPGTPLSWNSA 539

Query: 542 AKVVDHQHRFRPPLFVIARKSGRFWTIRDKVF 573
           A +V  Q   R P FV+ARK   FW +R+KVF
Sbjct: 540 ADIVALQPLLRHPDFVVARKQRHFWQVREKVF 571