Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., Excinuclease ABC subunit B from Enterobacter asburiae PDN3

 Score = 49.3 bits (116), Expect = 5e-10
 Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 30/190 (15%)

Query: 189 LLDEGFLTPAQLIDTPVMSYDFSQLKP------ANTGRYRESE---------------LD 227
           L++ GF  P+ L + P+   +F  L P      A  G Y   +               LD
Sbjct: 361 LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGEDVVDQVVRPTGLLD 420

Query: 228 LVIEQSQRATP--QIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPT--EHAALVIGDT 283
            +IE    AT    ++++I   +   + V++   T R AE++   L    E    +  D 
Sbjct: 421 PIIEVRPVATQVDDLLSEIRARSAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI 480

Query: 284 PTPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQ-----QIVG 338
            T ER  II+  +  +   LV +++L  G D P V L+AIL   +   L       Q +G
Sbjct: 481 DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540

Query: 339 RGLRLAAGKS 348
           R  R   GK+
Sbjct: 541 RAARNVNGKA 550