Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., DNA or RNA helicases of superfamily II from Enterobacter asburiae PDN3

 Score =  691 bits (1782), Expect = 0.0
 Identities = 337/572 (58%), Positives = 426/572 (74%), Gaps = 2/572 (0%)

Query: 2   YTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELV 61
           +TLRPYQ ++V A + +FR+H  PA IVLPTGAGKSLVIAELARLARGRVLVLAHVKELV
Sbjct: 3   FTLRPYQQEAVDATLAWFRKHREPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKELV 62

Query: 62  EQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHRV 121
            QNHAKY   GL   IF+AGL RKE+  +VVF SVQSV RNL  F+++FSLL++DECHR+
Sbjct: 63  AQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDLFRSEFSLLIVDECHRI 122

Query: 122 PDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCI 181
            DD +S YQ+++ HL  +NP +++LGLTATP+RLG GWIY+YH  G+VR ++   F DCI
Sbjct: 123 SDDDDSQYQQILAHLKAVNPHLRLLGLTATPFRLGKGWIYRYHYHGMVRGDDKALFSDCI 182

Query: 182 FELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQIV 241
           +ELP+ Y++  G+LTP + +D PV+ YDFS+L+  + G + E++L+  +++ +R TP I+
Sbjct: 183 YELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQSQSNGLFSEADLNQELKKQKRITPHII 242

Query: 242 AQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQIK 301
           +QI E A  R+GVMIFAATV HA EI  LLP   AAL+ G+ P PERD ++ AFK Q+ +
Sbjct: 243 SQIEEFAATRKGVMIFAATVEHAREITGLLPAGDAALITGEMPGPERDGLVDAFKAQRFR 302

Query: 302 FLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQYD 361
           +LVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLA GK+DCL+LDYAGN +D
Sbjct: 303 YLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPHD 362

Query: 362 LYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDDETGE 421
           LY PEVG PK  SD+  + + CPACGF N FWGK  A+G LIEH+GRRCQG+F DD+ G 
Sbjct: 363 LYTPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDD-GH 421

Query: 422 REHCGYRFRAKYCNECGADNDIAARICHECDTTLVDPDKKLKEALNLKDALVFECTDMSL 481
           RE C +RFR K C +C A+NDIAAR C ECDT LVDPD  LK AL LKDALV  C+ M+L
Sbjct: 422 REQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALKLKDALVLRCSGMAL 481

Query: 482 KVHKDAKGKSQLQVTYHGQDAVQVHQFWPLNTPRQKQQFHDQFVRPHLADKHRPFEAATP 541
           +   D KG+  L++TY+ +D   V + + + TP Q+  F   F+RPH      P    T 
Sbjct: 482 QPGADEKGE-WLKITYYDEDGADVSERFRVQTPAQRMAFEQLFIRPHTRTPGVPLRWITV 540

Query: 542 AKVVDHQHRFRPPLFVIARKSGRFWTIRDKVF 573
           A +V  Q   R P FV+ARK G+FW +R+K+F
Sbjct: 541 ADIVRQQVLLRHPDFVVARKKGQFWQVREKLF 572