Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 810 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC98

 Score = 69.7 bits (169), Expect = 4e-16
 Identities = 85/416 (20%), Positives = 165/416 (39%), Gaps = 68/416 (16%)

Query: 5   RPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELA-RLARG----RVLVLAHVKE 59
           R YQ  ++   +          ++V+ TG GK+    ++  RL +     R+L LA    
Sbjct: 171 RYYQLQAINKTIEAVSNGQNRVLLVMATGTGKTYTAFQIIWRLWKSKNKKRILFLADRNI 230

Query: 60  LVEQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFS-------- 111
           LV+Q   K   +   G   +   GR       +  ++   +    E Q  F         
Sbjct: 231 LVDQT--KNNDFQPFGTAMTKVSGRTIDPAYEIHLALYQAITGPEEDQKAFKQVAPDFFD 288

Query: 112 LLVIDECHRVPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRS 171
           L+VIDECHR    ++S++++++ +          +GLTATP            T  +  +
Sbjct: 289 LIVIDECHRGSASEDSAWREILDYFSSATQ----IGLTATPKE----------THEVSST 334

Query: 172 EEPRFFRDCIFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGR----------- 220
           +   +F D ++   +   +++GFL P +++   +   D    +P                
Sbjct: 335 D---YFGDPVYVYSLKEGIEDGFLAPYKVVRVDI-DVDLQGWRPTKGQTDLNGEVIDDRI 390

Query: 221 YRESELD--LVIEQSQRATPQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPT----- 273
           Y + + D  +VI++      + +   ++        ++F   + HAE + R L       
Sbjct: 391 YNQKDFDRTMVIDERTELVARTITDYLKRTNPMDKTIVFCNDIDHAERMRRALVNLNPEQ 450

Query: 274 -----EHAALVIGDTPT--PERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRP 326
                ++   + GD      + D  I   K   +       ++TTG DA    L+ + + 
Sbjct: 451 VKKNDKYVMKITGDDEIGKAQLDNFINPKKPYPV-IATTSELMTTGVDAKTCKLVVLDQN 509

Query: 327 TESVSLYQQIVGRGLRL--AAGKSDCLVLD-------YAGNQYDLYQPEVGDPKPD 373
            +S++ ++QI+GRG R+    GK    +LD       +A  ++D    +V D  P+
Sbjct: 510 IQSMTKFKQIIGRGTRIDERYGKLWFTILDFKKATELFADERFDGIPEKVMDTTPE 565