Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1142 a.a., Type I site-specific restriction-modification system, R (restriction) subunit and related helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 69.7 bits (169), Expect = 6e-16
 Identities = 96/422 (22%), Positives = 174/422 (41%), Gaps = 86/422 (20%)

Query: 3   TLRPYQADSVKAVVHYF--------RQHSTPAVIVLPTGAGKSLVIAELARLA-----RG 49
           T RPYQ ++++ V            +Q    +++++ TG+GK+   A +  +        
Sbjct: 362 TGRPYQTEAIQRVAENLSVIKDGKIKQRHRKSLLIMATGSGKTRTSASIVDMMVKCNWAK 421

Query: 50  RVLVLAHVKELVEQNHAKYEGY--GLTGAIFSAGLGRKETDQ-QVVFASVQSVVRNLSEF 106
           R+L LA    LV Q    +  +   LT    +     KE D  ++VF++  +++  + + 
Sbjct: 422 RILFLADRNALVTQAKNAFTEHLPDLTSIDLTK---EKENDSTRLVFSTYPTMMNQIDQA 478

Query: 107 QN---------QFSLLVIDECHRVPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGM 157
           ++          F L++IDE HR      S YQK        +    +LGLTATP +   
Sbjct: 479 RDGEGRFYGVGHFDLIIIDEAHR------SVYQKYRAIFQYFDAF--ILGLTATPKK--- 527

Query: 158 GWIYQYHTRGLVRSEEPRFFRDCIFELPIHYLLDEGFLTPAQLIDTPVM----SYDFSQL 213
                ++T  L   E+     +  F   +   +++ FL P + I  P+        +S+L
Sbjct: 528 --DVDHNTYELFEIEDD----NPTFAYELDQAVNDSFLVPPRAISVPLKFMREGIKYSEL 581

Query: 214 KPANTGRYRES-------ELDLVIEQSQ--------RATPQIVAQIIELAKARQG----- 253
                  Y E        E +  I++SQ            Q++  ++       G     
Sbjct: 582 SEKEKLEYEEKFGDPSNEEAEDGIDKSQLYKWLFNSNTVDQVLNHLMTSGIKVDGGDKIG 641

Query: 254 -VMIFAATVRHA---EEIYRLLPTEHAALV--IGDTPTPERDRIIQAF----KQQQIKFL 303
             +IFA   +HA   EE +     E++     + D  T +   I++ F    ++++ +  
Sbjct: 642 KTIIFAKNHKHAVYIEERFNKNYPEYSGKFCRVIDNQTEKAQDILERFVLDKEEKEPQIA 701

Query: 304 VNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAG-------KSDCLVLDYA 356
           ++V ++ TG DAP V  +   +P  SV+ + Q++GRG RL          K   L+ DY 
Sbjct: 702 ISVDMMDTGVDAPRVVNLVFFKPVRSVAKFWQMIGRGTRLRPNLFGPGQHKDSFLIFDYC 761

Query: 357 GN 358
            N
Sbjct: 762 EN 763