Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 966 a.a., DEAD/DEAH box helicase family protein from Bacteroides stercoris CC31F

 Score = 63.5 bits (153), Expect = 4e-14
 Identities = 86/390 (22%), Positives = 149/390 (38%), Gaps = 67/390 (17%)

Query: 5   RPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVEQN 64
           R  Q D++ +++ Y     T  V+   T  GK++  A L    +   LVL H K L+ Q 
Sbjct: 442 RDEQLDAINSLMPY-----TNGVLAATTAFGKTVTAAALIARKKVSTLVLVHSKALLLQW 496

Query: 65  HAKYEGY---GLTGAIFSAGLGRKETDQQVV--------------FASVQSVVRN--LSE 105
           H +   +          S   GRK+    +                A +QS   N  +  
Sbjct: 497 HERLTDFLEIEFAEPATSRKRGRKKVFSPIGCLDSTSNTLHGVIDIALMQSCFENGEVRP 556

Query: 106 FQNQFSLLVIDECHRVPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHT 165
           F  ++ ++++DECH V    + +++ V+ H+   +    V GLTATP R           
Sbjct: 557 FVREYGMVIVDECHHV---SSITFENVLRHITAHH----VYGLTATPIRKD--------- 600

Query: 166 RGLVRSEEPRFFRDCIFELPIHYLLDEGFLTPAQLIDTPVMSY---DFSQLKPANTGRYR 222
            GL    +P  F  C    PI +  D       Q+     + Y    F+  +     R  
Sbjct: 601 -GL----QPIIFMQCG---PIRFSAD----AKTQIQKQSFLRYLVPRFTSYRSVTDNRQS 648

Query: 223 ESELDLVIEQSQRATPQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVI-- 280
            + L   + +S+     I+  ++    A +  +I      H + +  +L   H A VI  
Sbjct: 649 FALLSQSLAESELRNTLIIEDVLNAVTAGRTPIILTGRTSHVKLLSGMLKP-HIANVIQL 707

Query: 281 -GDTPTPERDRIIQAF----KQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQ 335
            G+     +  ++Q      +   +  +     +  GFD P +D + +  P     L  Q
Sbjct: 708 TGEGTAKSKREVLQGLHDIPQNSPLVIVATGKYVGEGFDYPRLDTLFLALPISWKGLVAQ 767

Query: 336 IVGRGLRLAAGKSDCLVLDYAGNQYDLYQP 365
             GR  R   GK+D  + DY     D+++P
Sbjct: 768 YAGRLHRENEGKADVRIYDY----IDIHEP 793