Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1170 a.a., endonuclease R Type I restriction enzyme from Escherichia coli BL21

 Score = 69.3 bits (168), Expect = 8e-16
 Identities = 103/433 (23%), Positives = 177/433 (40%), Gaps = 77/433 (17%)

Query: 4   LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKS-LVIAELARLARG----RVLVLAHVK 58
           LR YQ D+V+AV     +     ++ + TG GK+   IA + RL +     R+L L   +
Sbjct: 445 LRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMMFRLIQSQRFKRILFLVDRR 504

Query: 59  ELVEQNHAKYEGYGLTGAIFSA-----GLGRK--ETDQQVVFASVQSVVRNLSEFQN--- 108
            L EQ    +E   + G  F++     GL  K  E   ++  A+VQS+V+   +      
Sbjct: 505 SLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMP 564

Query: 109 --QFSLLVIDECHR--VPD--------------DKNSSYQKVITHLLELNPGMKVLGLTA 150
             ++  +V+DE HR  + D              D  S+Y++++ H   +      + LTA
Sbjct: 565 VARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVK-----IALTA 619

Query: 151 TP----YRLGMGWIYQYHTR-----GLVRSEEPRFFRDCIFELPIHYLLDEGFLTPAQLI 201
           TP     ++    +Y+Y  R     G +  ++P        ++      +  +L+  + +
Sbjct: 620 TPALHTVQIFGEPVYRYTYRTAVIDGFLIDQDPPI------QITTRNAQEGVYLSKGEQV 673

Query: 202 D--TPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQIVAQIIELAKARQGVMIFAA 259
           +  +P        L+        +    LVI    RA    +   ++     Q  ++F  
Sbjct: 674 ERISPQGEVINDTLEDDQDFEVADFNRGLVIPAFNRAVCNELTNYLD-PTGSQKTLVFCV 732

Query: 260 TVRHAEEIYRLLPT---------EHAALV--IGDTPTPER--DRIIQAFKQQQI-KFLVN 305
           T  HA+ +   L T         EH A++   GD     R    +I  F ++++   +V 
Sbjct: 733 TNAHADMVVEELRTAFKKKYPQLEHDAIIKITGDADKDARKVQTMITRFNKERLPNIVVT 792

Query: 306 VSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKS-------DCLVLDYAGN 358
           V +LTTG D P +  I  LR   S  LY+Q+ GR  RL    +       DC+ +     
Sbjct: 793 VDLLTTGVDIPSICNIVFLRKVRSRILYEQMKGRATRLCPEVNKTSFKIFDCVDIYSTLE 852

Query: 359 QYDLYQPEVGDPK 371
             D  +P V  PK
Sbjct: 853 SVDTMRPVVVRPK 865