Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1150 a.a., Type-1 restriction enzyme R protein from Alteromonas macleodii MIT1002

 Score = 61.2 bits (147), Expect = 2e-13
 Identities = 97/416 (23%), Positives = 165/416 (39%), Gaps = 100/416 (24%)

Query: 4   LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLV-IAELARLARG----RVLVLAH-- 56
           LR YQ  ++++V    +     A++ + TG GK+   IA + RL +     R+L L    
Sbjct: 427 LRDYQKKAIQSVEQAIKDEKERALVAMATGTGKTKTCIALVYRLLKAERFRRILFLVDRS 486

Query: 57  ---VKELVEQNHAKYEGYGLTGAIFSAGLGRK---------ETDQQVVFASVQSVVRNL- 103
              V+  ++    + E        F   LG +         + D +V  A+VQ +V+ + 
Sbjct: 487 ALGVQATIDFGEVRMENLNTFADTFDV-LGMEPEKNPKPTPDDDTKVHVATVQGLVKRIM 545

Query: 104 -------SEFQNQFSLLVIDECHRV----------------PDDKNSSYQKVITHLLELN 140
                       Q+  +V+DECHR                   D  S Y+ VI +     
Sbjct: 546 YPSEDATKPGVGQYDCIVVDECHRGYLLDRELSETEVKFRDQQDYVSKYRAVIDYFDAFK 605

Query: 141 PGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCIFELPIHYLLDEGFLT---- 196
                +GLTATP           HT  +        F D +F       + +G+L     
Sbjct: 606 -----IGLTATP---------AIHTTDI--------FGDPVFSYSYTEAVIDGYLVDHLP 643

Query: 197 PAQL---IDTPVMSYDFS---QLKPANTGR----YRESELDLVIEQSQRA------TPQI 240
           P ++   ++T  + Y+ +   Q+    T +    +   ELD  + Q  R       T  I
Sbjct: 644 PVRIHTKLNTDGIHYNVNEEVQVYDPQTNQLELIHTPDELDFDVAQFNRKVIAPEFTKAI 703

Query: 241 VAQIIELAK----ARQGVMIFAATVRHAEEIYRLLPT--EHAALVIGDTP----TPERDR 290
              +IE       +++  +IF  T +HA+E+   L    EH    + D      T   D+
Sbjct: 704 AKWLIESDSIDPYSQEKTLIFCVTDKHADEMVEALKDACEHYHGAVDDDAIMKITGASDK 763

Query: 291 ---IIQAFKQQQI-KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLR 342
              +I+ +K  ++   +V V +LTTG D P +  +  +R   S  LY+Q++GR  R
Sbjct: 764 PLQLIRRYKNDRLPNIVVTVDLLTTGVDVPSICNLVFMRRVNSRILYEQMLGRATR 819