Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., UvrABC system protein B from Acinetobacter radioresistens SK82

 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 29/189 (15%)

Query: 189 LLDEGFLTPAQLIDTPVMSYDFSQLKP------ANTGRYRESELDLVIEQSQRATPQIVA 242
           L++ GF  P+ L + P+   ++ ++ P      A   RY   + + V+EQ  R T  I  
Sbjct: 363 LVNYGFRLPSALDNRPMKFEEWERIIPTTVFVSATPARYELEKSEQVVEQVVRPTGLIDP 422

Query: 243 QI---------------IELAK-ARQGVMIFAATVRHAEEIYRLLPTE--HAALVIGDTP 284
           +I               I + K   + V++   T R AE++   L       A +  D  
Sbjct: 423 EIEIRPVLTQVDDVLSEINIRKNLNERVLVTTLTKRMAEDLTAYLKEYGVKVAYLHSDID 482

Query: 285 TPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQ-----QIVGR 339
           T ER +II   +      LV +++L  G D P V L+AIL   +   L       Q +GR
Sbjct: 483 TVERVKIIHELRTGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGR 542

Query: 340 GLRLAAGKS 348
             R   GK+
Sbjct: 543 AARNIKGKA 551



 Score = 29.6 bits (65), Expect = 4e-04
 Identities = 15/70 (21%), Positives = 36/70 (51%)

Query: 8  QADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVEQNHAK 67
          Q  +++ +V   +Q     +++  TG+GK+  +A +    +   +V+AH K L  Q + +
Sbjct: 19 QPQAIEKLVKGIQQGYKSQLLLGVTGSGKTYTMANVIAQTQRPTIVMAHNKTLAAQLYGE 78

Query: 68 YEGYGLTGAI 77
          ++ +    A+
Sbjct: 79 FKAFFPNNAV 88