Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., rRNA pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score = 77.0 bits (188), Expect = 3e-19
 Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 9/222 (4%)

Query: 14  TRKEATQLLKSGEVTVDD-VVQKSGAFKLKETSCVEWQGREITLHGPRYIMMHKPDGVVC 72
           +R +A Q +++G V++D  VV+      L +   V   G+ +      Y+  +KP G+V 
Sbjct: 34  SRSQAEQWVRAGRVSLDGRVVRDPYHPTLIDRQQVAVDGQPVKSAKCVYVAFNKPRGLVV 93

Query: 73  SHEDGFNQ-TALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHRVTSPKHKCEKTY 131
           S  D   + T  T L    +  L   GRLD  + GLLL+++D  W+  +T+P    +KTY
Sbjct: 94  SAADEHGRATVYTTLAAAGLPWLGPVGRLDKASEGLLLLSNDTVWAAGITNPATHLDKTY 153

Query: 132 RVWLADPIQADYAEQFNRGIELRGE----RELTLPAQLEVISETEVLLTIHEGKYHQVKR 187
            V ++             GI+  G+    R + L    E  +  E++L   EG+   ++R
Sbjct: 154 HVQVSGLPDTAVLAAMLAGIDDAGDLLKARRVALLRTGEKNAWLEMVL--DEGRNRHIRR 211

Query: 188 MFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
           + AALG  V+ L R  IG + L E L  G++R L+ +EV ++
Sbjct: 212 LLAALGFDVLRLIRVSIGPLALGE-LAKGQWRQLSADEVGAL 252