Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score = 99.8 bits (247), Expect = 3e-26
 Identities = 66/179 (36%), Positives = 95/179 (53%), Gaps = 24/179 (13%)

Query: 62  IMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHRVT 121
           + ++KP GV+C   D   +   TL D V  +D++ AGRLD D+ GLLL+TDDG+ +HR+T
Sbjct: 3   LALNKPYGVLCQFTDELGRA--TLADFVMQKDVYAAGRLDQDSEGLLLLTDDGRLAHRLT 60

Query: 122 SPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVL------- 174
            P+HK  KTY   +   I     +   RG+ L      TLPA+    ++ + L       
Sbjct: 61  DPRHKQAKTYLAQVEGTIDEATLQSLRRGVVLNDGP--TLPAEAAFAAKPDWLWPRDPPV 118

Query: 175 ------------LTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYL 221
                       LT+ EG+  QV+RM AA+G   + L R RIG+  LD  L PGE R++
Sbjct: 119 RFRQSIPTSWLSLTLREGRNRQVRRMTAAVGFPTLRLIRVRIGEYALD-GLAPGETRHI 176