Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 29/245 (11%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITLHGPR 60
           MR++K++ +A   +R+EA + L +G VT++  V  +GA  L        +G E+ + G  
Sbjct: 1   MRVNKYISEAGLCSRREADEWLAAGRVTINGEVVSTGAKAL--------EGDEVRVDGEI 52

Query: 61  ----------------YIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDT 104
                           YI ++KP GV C+ +       +  +D    Q +   GRLD D+
Sbjct: 53  VKARILAATPAAKKAVYIALNKPVGVTCTTDQAVAGNIVDFVDHP--QRIFPIGRLDKDS 110

Query: 105 TGLLLITDDGQWSHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQ 164
            GL+L+T +G   + +   ++  EK Y V +   +  ++     +G+ + G  ++T P +
Sbjct: 111 EGLILLTSNGDIVNEILRAENHHEKEYLVAVNKAVTDEFLAGMAKGVRIHG--QMTRPCR 168

Query: 165 LEVISETEVLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEE 224
              I++    + + +G   Q++ M AA G +V  L R RI  + L   L+PG++R LTE 
Sbjct: 169 TRRIAKFGFSIVLTQGLNRQIRLMAAAFGYRVTQLRRVRIDNVKLGH-LKPGQWRNLTEA 227

Query: 225 EVASI 229
           E+  +
Sbjct: 228 ELKGL 232