Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score = 89.7 bits (221), Expect = 4e-23
 Identities = 62/179 (34%), Positives = 92/179 (51%), Gaps = 23/179 (12%)

Query: 59  PRYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSH 118
           P+ I+ +KP  V+    D   +   TL D + I  ++ AGRLD D+ GLLL+T+DGQ   
Sbjct: 32  PKLILFNKPFDVLTQFSDEGGRA--TLKDFIAIPGIYPAGRLDRDSEGLLLLTNDGQLQA 89

Query: 119 RVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVL---- 174
           R+  PKHK  KTY V +      +  ++   G+EL   +  TLPAQ   + E ++     
Sbjct: 90  RIADPKHKLAKTYWVQVEGEPTEEQLQRLRDGVELNDGK--TLPAQARQLDEPQLWPRNP 147

Query: 175 --------------LTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYR 219
                         L I EG+  QV+RM AA+G   + L R RIG  T+D  L+ G+++
Sbjct: 148 PVRFRKNIPTYWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTID-GLDQGQWK 205