Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) from Sphingobium sp. HT1-2

 Score = 94.7 bits (234), Expect = 1e-24
 Identities = 68/180 (37%), Positives = 97/180 (53%), Gaps = 24/180 (13%)

Query: 60  RYIMMHKPDGVVCSHEDG-FNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSH 118
           R I+ +KP GV+C   D        TL D V+   ++ AGRLD+D+ GLLL+TDDG+   
Sbjct: 3   RLILFNKPYGVLCQFSDERTGPPRPTLADYVDQPGVYPAGRLDLDSEGLLLLTDDGRLQA 62

Query: 119 RVTSPKHKCEKTYRVWL-ADPIQADYAEQFNRGIELRGERELTLPAQLEVISETE----- 172
           R+  P+ K  KTY V +  DP  A  A    RG++L+    +TLPA++E I +       
Sbjct: 63  RIADPRFKIPKTYLVQVEGDPDDAPLA-ALRRGVQLKD--GMTLPAEVERIDDPALWPRD 119

Query: 173 -------------VLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYR 219
                        + LTI EG+  QV+RM AA+G   + L R RIG  T+D+ + PG +R
Sbjct: 120 PPVRFRKSVPDCWLRLTIREGRNRQVRRMTAAVGLPTLRLVRWRIGDWTIDD-IAPGSWR 178