Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., 23S rRNA pseudouridine synthase F from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 94.0 bits (232), Expect = 3e-24
 Identities = 66/231 (28%), Positives = 123/231 (53%), Gaps = 8/231 (3%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGA-FKLKETSCVEWQGREITLHGP 59
           +RL+KF+ D+   +R+EA ++++ G V V+      GA    K+   V+    E+    P
Sbjct: 4   IRLNKFISDSGYCSRREADKMIEQGRVMVNGKRPDVGAKVTAKDKVRVDGNLLEVNAVEP 63

Query: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHF-AGRLDVDTTGLLLITDDGQWSH 118
            Y++++KP G+  + +       ++     N  +  F  GRLD D+ GL+++T+DG   +
Sbjct: 64  VYLLLNKPAGIETTTDTSQRDNIISF---TNYPERIFPVGRLDKDSEGLIILTNDGDIVN 120

Query: 119 RVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVLLTIH 178
           ++    ++ EK Y V +  PI  D+ E+ + G+ + G          E  ++  ++LT  
Sbjct: 121 KILRAGNRHEKEYVVTVDRPINQDFVEKMSGGVSILGVNTKKCFVAQEGPNKFRIILT-- 178

Query: 179 EGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
           +G   Q++RM  ALG +V  L R RI  ++L++ +  G++R +TE EVA +
Sbjct: 179 QGMNRQIRRMCEALGYEVQTLQRTRIMHLSLNK-IPLGQWRNMTEPEVAEL 228