Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., 16S rRNA pseudouridylate 516 synthase (NCBI) from Escherichia coli BW25113

 Score =  261 bits (666), Expect = 1e-74
 Identities = 132/230 (57%), Positives = 164/230 (71%), Gaps = 1/230 (0%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITL-HGP 59
           MRLDKF+   LG +R  A + ++   VTVD  + ++ AFKL     V + G  +   HGP
Sbjct: 1   MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 60

Query: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119
           RY M++KP G VCS +D  + T L  LDE     LH AGRLD+DTTGL+L+TDDGQWSHR
Sbjct: 61  RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR 120

Query: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVLLTIHE 179
           +TSP+H CEKTY V L  P+  D AEQF +G++L  E++LT PA LEVI+ T+V LTI E
Sbjct: 121 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE 180

Query: 180 GKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
           G+YHQVKRMFAA+GN V+ LHRERIG ITLD  L PGEYR LTEEE+AS+
Sbjct: 181 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASV 230