Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., rRNA pseudouridine synthase from Fusobacterium nucleatum SB010

 Score =  105 bits (263), Expect = 6e-28
 Identities = 72/238 (30%), Positives = 132/238 (55%), Gaps = 14/238 (5%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITLHGPR 60
           MR++KFL      +R+   + ++ G +TV+  +  +G   + E   +   G++I      
Sbjct: 1   MRINKFLSTLGIASRRAVDKYIEEGRITVNGNIATTG-MDISENDNIFIDGKKIKTDVNE 59

Query: 61  ---YIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFA-GRLDVDTTGLLLITDDGQW 116
              Y M++KP  V+ S  D  ++   T++D +      F  GRLD  T+GL+L+T+DG+ 
Sbjct: 60  EKVYFMLNKPLEVLSSSSD--DRGRKTVVDLIKTDKRIFPIGRLDYMTSGLILLTNDGEL 117

Query: 117 SHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVI----SETE 172
            +R+  PK +  K Y V +   I+ +   +  +G+ L   +  TLPA++  I    ++T 
Sbjct: 118 FNRIVHPKSEIYKKYYVKIFGEIKKEEIAELKKGVLLNDGK--TLPAKISGIKYDKNKTS 175

Query: 173 VLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASIW 230
           + ++I EG+  Q++RM    G KV+ L RE+IG+++L + LE G+YR LT++E+  ++
Sbjct: 176 MYISIREGRNRQIRRMIEKFGYKVLMLRREKIGELSLGD-LEEGKYRKLTKQEIEYLY 232