Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., 16S rRNA pseudouridine(516) synthase RsuA from Erwinia tracheiphila SCR3

 Score =  251 bits (641), Expect = 9e-72
 Identities = 128/230 (55%), Positives = 163/230 (70%), Gaps = 1/230 (0%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITLH-GP 59
           MRLDKFL   L  +R  A + L++ +VTVD  V + GAF+L   + V++ G  + L  GP
Sbjct: 1   MRLDKFLSQQLEISRAIAGRELRARKVTVDGEVVRDGAFRLTAENEVKYDGNLLQLETGP 60

Query: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119
           RY M++KP G VCS +D  + T L  L+E     LH AGRLD+DTTGL+L+TDDGQWSHR
Sbjct: 61  RYFMLNKPQGYVCSTDDPDHPTILYFLEEPTAYKLHAAGRLDIDTTGLVLMTDDGQWSHR 120

Query: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVLLTIHE 179
           +TSP+H CEKTY V L  P+  D A +F +G++L  E++LT PA LE IS+ +V LTI E
Sbjct: 121 ITSPRHHCEKTYLVTLESPLADDVATKFQQGVQLHNEKDLTKPALLEAISDNQVRLTISE 180

Query: 180 GKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
           G+YHQVKRMFAA+GN V+ LHRERIG I LD  L+PGEYR L  EE+ASI
Sbjct: 181 GRYHQVKRMFAAVGNHVVALHRERIGDIQLDAQLQPGEYRALNAEEIASI 230