Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., pseudouridine synthase from Enterobacter asburiae PDN3

 Score =  272 bits (696), Expect = 4e-78
 Identities = 136/230 (59%), Positives = 169/230 (73%), Gaps = 1/230 (0%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITL-HGP 59
           MRLDKF+   LG +R  A + +++  VTVD  + K  AFKL+    VE+ G  +T  HGP
Sbjct: 1   MRLDKFIAQQLGVSRAIAGREIRASRVTVDGDIVKDTAFKLQPDHQVEYDGNPLTQQHGP 60

Query: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119
           RY M++KP+G VCS +D  + T L  LDE     LH AGRLD+DTTGL+L+TDDGQWSHR
Sbjct: 61  RYFMLNKPEGYVCSTDDPDHPTVLYFLDEPVAHKLHAAGRLDIDTTGLVLMTDDGQWSHR 120

Query: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVLLTIHE 179
           +TSP+H CEKTY V L  P+  D AEQF +G++L  E++LT PA LEVI+ TEV LTI E
Sbjct: 121 ITSPRHHCEKTYLVTLESPVSDDTAEQFTKGVQLHNEKDLTKPAVLEVITPTEVRLTISE 180

Query: 180 GKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
           G+YHQVKRMFAA+GN+V+GLHRERIG I LD  L PGEYR LTEEE+AS+
Sbjct: 181 GRYHQVKRMFAAVGNRVVGLHRERIGAIELDPDLAPGEYRPLTEEEIASV 230