Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., 23S rRNA pseudouridine(2605) synthase RluB from Dickeya dianthicola ME23

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 23/231 (9%)

Query: 2   RLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSG-AFKLKETSCVEWQGREITLHGP- 59
           +L K L  A   +R+E   ++++G ++VD  +   G   ++   + +   G  +++    
Sbjct: 4   KLQKVLARAGHGSRREIESMIEAGRISVDGKIATLGDRVEVTRATKIRLDGHVVSVRETE 63

Query: 60  ----RYIMMHKPDGVVCSHEDGFNQTALTLLDEV-NIQDLHFA--GRLDVDTTGLLLITD 112
               R +M +KP+G +C+  D   +   T+ D +  IQ   +   GRLDV+T+GLLL T 
Sbjct: 64  ETVCRVLMYYKPEGELCTRSDPEGRP--TVFDRLPRIQGYRWVAVGRLDVNTSGLLLFTT 121

Query: 113 DGQWSHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVIS--- 169
           DG+ ++R+  P  + E+ Y V +   +  D   Q ++G++L        PA    I    
Sbjct: 122 DGELANRLMHPSREVEREYAVRVFGEVGDDKIRQLSKGVQLEDG-----PAAFRSIRYQG 176

Query: 170 ----ETEVLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPG 216
                    +T+ EG+  +V+R++ A+G +V  L R R G I L + +  G
Sbjct: 177 GEGLNQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIQLPKGVPRG 227