Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 85.5 bits (210), Expect = 8e-22
 Identities = 65/234 (27%), Positives = 121/234 (51%), Gaps = 14/234 (5%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITLHGPR 60
           +R++K+L +    +R+ A +LL+ G +T++  V + G  K+     V   G+ ++   P+
Sbjct: 6   VRINKYLSEIGYCSRRAADKLLEEGCITINGKVPELGT-KVSPGDDVRVNGKLVS--PPK 62

Query: 61  ----YIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFA-GRLDVDTTGLLLITDDGQ 115
               YI  HKP G+VC+ +    +    ++D +N     F  GRLD  + GL+ +T+DG 
Sbjct: 63  EDFIYIAFHKPVGIVCTTDTKREKD--NIIDYINHPKRIFPIGRLDKPSEGLIFLTNDGD 120

Query: 116 WSHRVTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVLL 175
             +++   ++  EK Y V +  PI  ++  +   G+ +     +T   ++E I + +  +
Sbjct: 121 IVNKILRARNNHEKEYVVTVDKPITPNFIHKMANGVPILD--TVTRKCKVEQIGKRKFKI 178

Query: 176 TIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
            + +G   Q++RM   L  +V  L R RI  + LD  +  G++RYLT  E+A I
Sbjct: 179 VLTQGLNRQIRRMCQYLDYEVTKLKRIRIMNVQLD--MPVGKWRYLTPAELAEI 230