Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  117 bits (293), Expect = 3e-31
 Identities = 74/232 (31%), Positives = 133/232 (57%), Gaps = 6/232 (2%)

Query: 1   MRLDKFLCDALGTTRKEATQLLKSGEVTVDDVVQKSGAFKLKETSCVEWQGREITLHGPR 60
           +RL+K++ +A   +R++A +L++ GEV V+  V     +++  T  V ++G+ I    P 
Sbjct: 148 IRLNKYIANAGICSRRDADKLIEKGEVKVNGEVITELGYRVLLTDKVVYKGKLINPEKPV 207

Query: 61  YIMMHKPDGVVCSHEDGFNQ-TALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119
           Y++++KP   + + +D  N+ T + L+     + +   GRLD +TTGLLL T+DG+ + +
Sbjct: 208 YVLLNKPKDFITTTDDPMNRKTVMHLVSSACEERIFPVGRLDRNTTGLLLFTNDGELAAK 267

Query: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISETEVL--LTI 177
           ++ P  K  K Y+V L  PI   + E+   G+ L  E  L     ++++S+   +  L I
Sbjct: 268 LSHPAEKVRKIYQVTLDSPITKTHFEEIAEGLTL--EDGLVNVDDIQILSKDRTILGLEI 325

Query: 178 HEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYLTEEEVASI 229
           H GK   V+R+FA LG +V+ L R     +T  + L  G++R+LTE+EV ++
Sbjct: 326 HVGKNRIVRRIFAHLGYEVVALDRVTYAGLT-KKDLSRGKWRFLTEKEVINL 376