Pairwise Alignments

Query, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 180 a.a., Ribosomal large subunit pseudouridine synthase E from Alteromonas macleodii MIT1002

 Score = 76.6 bits (187), Expect = 3e-19
 Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 23/177 (12%)

Query: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119
           + ++ +KP  V+    D   +   TL D +++  ++ AGRLD D+ GLL++T+DG+  H+
Sbjct: 6   KVVLFNKPFQVLSQFTDADGRE--TLKDYIDVPGVYAAGRLDRDSEGLLVLTNDGKLQHK 63

Query: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEV------------ 167
           + +PK K  KTY V +   +     +    G+EL+    +T PA+++             
Sbjct: 64  LANPKAKTSKTYWVQVEGIMDEKAMQALRDGVELKD--GMTRPAKVKAMEAPGVWPRNPP 121

Query: 168 ------ISETEVLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEY 218
                 I  + V +TI EG+  QV+RM A +G   + L R R+G  T+D  ++ G Y
Sbjct: 122 VRFRQSIPTSWVEITITEGRNRQVRRMTAHVGYPTLRLIRYRVGNWTID-GIDNGSY 177