Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., multidrug effflux MFS transporter from Rhodanobacter sp000427505 FW510-R12

 Score =  164 bits (415), Expect = 4e-45
 Identities = 103/378 (27%), Positives = 186/378 (49%), Gaps = 4/378 (1%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFG 80
           +L AL  + P +ID   PA P +   FGV+A A+Q  ++ Y A +A   L HG ++D+ G
Sbjct: 15  LLAALSMIGPFSIDAVFPAFPLVGARFGVDAAALQQLISVYLATYAAMSLFHGAISDAVG 74

Query: 81  RRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFA 140
           R+PV++ G+ ++  A++ +A ++    L   RA QG +  A  VV +AV+RD  +     
Sbjct: 75  RKPVIVAGLLVYAAASVGAAVSSSFAMLLTCRALQGMSAGAGLVVGRAVIRDSLEGPAAQ 134

Query: 141 RAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPEN 200
           R MS V ++  +AP++APM+G  L    GW  IFW+LA+FA L+   +   + ET  P  
Sbjct: 135 RLMSQVMMIFGVAPVIAPMVGALLLSLDGWHGIFWLLAVFALLLALALQRFLDETHPPAR 194

Query: 201 RQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFGY 260
           R     R  +  Y    ++ V   L+ S + +FAG+F ++ +   +   +  +S  GF +
Sbjct: 195 RTRFAPRPLLAGYLSFGRDRVFWPLLVSSSVNFAGLFLYIASAPHIVRGLLQLSAQGFPW 254

Query: 261 LFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMA-GIGLFVSWVLDWGL--WGTV 317
           LF   +  +I    ++GR  ++  +   +     + L+A    L ++  L      W  +
Sbjct: 255 LFVPVVSGLIGGAWLSGRMAERRSAKFTVSLGYAVMLLACAAHLLLALALPAPRLPWSML 314

Query: 318 PFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTETW 377
           P ++  +G      + ++ LLL ++P   G  SS+         S +  V++ L   +  
Sbjct: 315 PLILHAIGVQLAFPTLTL-LLLDRFPHHRGGISSVQAFASLMLCSFVAGVMSPLLSGDML 373

Query: 378 PMIFVMAACSVLSGAFYW 395
            +    +A ++L    +W
Sbjct: 374 QLALGASALTLLGVLAWW 391