Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Bicyclomycin resistance protein from Xanthobacter sp. DMC5

 Score =  158 bits (399), Expect = 3e-43
 Identities = 110/383 (28%), Positives = 187/383 (48%), Gaps = 24/383 (6%)

Query: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           I+ G +  L P+++ +Y PA+PT+   FG +   V++TLT +  GFA+ QL+ GPL+D++
Sbjct: 24  IIGGMMVMLGPVSLSLYTPALPTLVEVFGTSIATVKLTLTVFFFGFAVSQLICGPLSDAY 83

Query: 80  GRRPVML--CGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDRE 137
           GRRPV L   GI+L G    + A T G   L   R  QG   AA   + +A+VRD +  +
Sbjct: 84  GRRPVALGFFGIYLSGAVVAMLAPTIG--WLVAGRILQGIGAAAGIALSRALVRDQYTGQ 141

Query: 138 DFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLS 197
             AR M+ +  ++ + P ++P IGG L   FGW S+F  +  F   ++ +++ ++PET  
Sbjct: 142 ASARVMNLIGTILAIGPAISPTIGGFLLGAFGWHSVFVAMTCFGLALMTLLLLRVPETNR 201

Query: 198 PENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDG 257
             + +    R+   +Y  L  +   M    +   +  G++    A  FV ID  G+SP  
Sbjct: 202 TPDPRLAAPRAVAASYRRLLSDRGFMRAALTAGSALGGIYTLAAALPFVLIDRVGLSPTQ 261

Query: 258 FGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFV----------SW 307
           FG    +   A +  T I    + +  +  ++   L L L   I + V          S 
Sbjct: 262 FGVAMMMQTGAFMFGTLIARPLLNRFKAQQLILPGLLLVLTGAIAMAVGPHVVALSTLSV 321

Query: 308 VLDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAV 367
           +L    W     ++L   T +          L+++  +AG AS+L G L+ G+G  IG  
Sbjct: 322 MLPISFWACGCALLLPGCTTNA---------LARFGSIAGAASALTGFLQIGSG-FIGTS 371

Query: 368 VAALPGTETWPMIFVMAACSVLS 390
           ++AL  +    M  ++ A +V++
Sbjct: 372 ISALLPSPLLAMTILVPAMAVMA 394