Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Bicyclomycin resistance protein from Xanthobacter sp. DMC5

 Score =  144 bits (362), Expect = 6e-39
 Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 20/362 (5%)

Query: 21  VLGALGALTPLAIDMYLPAMPTIARDFGV-NAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           ++  L  +T  +ID  LPA   I  DF + NA  VQ+ + AY  G    Q  +GP++D  
Sbjct: 39  LIALLMGMTAFSIDNLLPAFGAIRADFALENANHVQVMVYAYLIGIGGAQFFYGPISDVL 98

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139
           GRRP++  G+ ++ + ++++  T     L   R  QG   AA  V+  A+VRD F+  D 
Sbjct: 99  GRRPILFAGLAVYALGSLIALFTRDFNVLIVARLIQGMGAAAGRVLAIAIVRDRFEGRDM 158

Query: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199
           AR MS   +V    P++AP +G  + ++  W  IF  + L A  + A    ++PETL PE
Sbjct: 159 ARIMSLSMMVFLTVPIIAPALGSLILVFGSWHLIFVAMLLLALALFAWFGLRMPETLHPE 218

Query: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVY-IDIY---GVSP 255
            R P   RS  +          ++G   +       + A++ + + V+  D+Y    + P
Sbjct: 219 YRIPFSMRSIGKAAMLTLTTRRSVGYAVAIGLMMGSLMAYVGSASQVFQTDVYRLGNLFP 278

Query: 256 DGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWG 315
             F  + G+  VA    + +N   V ++G    L  A  L  +A  GL V+  +   +W 
Sbjct: 279 IAFAAVAGIMAVA----SFLNASLVHRLGMRR-LSHAGILGFIAAGGLMVASSV---IWN 330

Query: 316 TVPFVVLFVGTIST-------IGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVV 368
             P +VLF G ++           N   + +     +AGTASS  G       +++G VV
Sbjct: 331 GKPPLVLFCGLVAAGQFLFALTVPNFNSMAMEPLGAVAGTASSFIGGFTTLLAAVLGFVV 390

Query: 369 AA 370
            +
Sbjct: 391 GS 392