Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  147 bits (372), Expect = 4e-40
 Identities = 103/376 (27%), Positives = 184/376 (48%), Gaps = 8/376 (2%)

Query: 12  PQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLL 71
           P  SLL  +V  AL AL  ++  + +P +  I +     AG+  + L+A+ A F +GQLL
Sbjct: 7   PSRSLLFLLV--ALTALGEVSTQLIIPGLGAIEQALAAPAGSSLMALSAFVAAFGLGQLL 64

Query: 72  HGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVR 131
            GPL+D  GRRPV++ G+ L+G+A +     + IE     R  QG    AA V+ + VVR
Sbjct: 65  FGPLSDRIGRRPVLIGGLVLYGLATLSMLLVDDIEHFIAARVLQGLGACAALVLARTVVR 124

Query: 132 DMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWK 191
           D++ + +   A++   + +  A +VAPM+GG L  W GWR+   +     ++V+ +V+  
Sbjct: 125 DVW-KAEAGPALALTMIGMLYAIVVAPMVGGLLIKWLGWRAPIMLALAIGSVVLLVVLLF 183

Query: 192 IPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIY 251
             E+    + +   +RS    Y DL +         + A ++  MFA +   + V+I++ 
Sbjct: 184 FRESNHYLDPKAGHWRSLGGQYLDLLRGRQYRAFAVALACTYGAMFAVIAGSSAVFINLL 243

Query: 252 GVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDW 311
           G S   +G  FGL +  +I  +T   R + ++G   ++   + +    G+   V + L +
Sbjct: 244 GFSSLEYGINFGLIVSMLIVGSTYTRRNIMRLGPQRIVTMGVAMVAAGGVSAVVIYAL-F 302

Query: 312 G---LWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVV 368
           G   L   +P  ++ +G    +  +  G ++    R AG A+ L G  +    +  G ++
Sbjct: 303 GLSVLGLDIPIALVTLGGGLVLPGSVTGGVMPNAHR-AGLAAGLMGFAQMFGATCSGVLL 361

Query: 369 AALPGTETWPMIFVMA 384
           + L      PMI + A
Sbjct: 362 SLLRDGSATPMIVIQA 377