Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  199 bits (507), Expect = 9e-56
 Identities = 117/385 (30%), Positives = 203/385 (52%), Gaps = 5/385 (1%)

Query: 18  LYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLAD 77
           L ++LG + A+ P AID+YLPA+PT+      +   VQ++LT +     + QL +GP++D
Sbjct: 8   LALLLGLITAVGPFAIDIYLPALPTLGASLHASPALVQMSLTVFFVIVGVCQLFYGPISD 67

Query: 78  SFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDRE 137
            FGR+P +  G+ +F +A++  A    IE L   RA Q F   A  V+ +A+VRD++   
Sbjct: 68  VFGRKPPIYAGLVIFAVASVGCALAPTIETLIAFRALQAFGACAGMVIPRAIVRDLYTGH 127

Query: 138 DFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLS 197
           + A+ M+ + LV++++P++AP+ G  +   + WR +F VLA+ A   + M + ++PET  
Sbjct: 128 EAAKLMALLMLVMSVSPILAPLAGSLVIALWSWREVFAVLAVVAVACLVMTIVQLPETHP 187

Query: 198 PENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDG 257
            E R      +   +Y  L ++PV +GL     F  A  F F+ +  FVYI+ YG++P  
Sbjct: 188 AERRLGKTLGNAFSSYGALLRDPVFIGLSVVCGFGLATFFVFIGSAPFVYIEYYGLTPTQ 247

Query: 258 FGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFAL--FLQLMAGIGLFVSWVLDWGLWG 315
           F   F LN  +  A++ +  R   + G   ++R+++     +MA +     WV    L  
Sbjct: 248 FSLGFALNAASFFAMSQLTARLTARFGLAPLIRWSVVAVAAVMALLAATTLWVDSLALMM 307

Query: 316 TVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTE 375
           T+ F+    G +  +   +  L L  +  +AG+AS+L G ++  T ++   VV       
Sbjct: 308 TLLFIGF--GFLGLLLPAAGVLSLEDHGAVAGSASALLGAIQMITAALSMTVVGVFADHT 365

Query: 376 TWPMIFVMAACSVLSG-AFYWTLGR 399
             PM+  +A C++ +     WTL R
Sbjct: 366 PAPMLIGIALCAIAAMLTTLWTLRR 390



 Score = 32.3 bits (72), Expect = 3e-05
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 1   MSASTVNTQQTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTA 60
           ++A+T+       M  LL+I  G LG L P A  + L     +A       GA+Q+ +TA
Sbjct: 293 LAATTLWVDSLALMMTLLFIGFGFLGLLLPAAGVLSLEDHGAVAGSASALLGAIQM-ITA 351

Query: 61  YTAGFAIGQLLHGPLADSFGRRPVMLCGIFLFGIAAMVS 99
                A+   + G  AD       ML GI L  IAAM++
Sbjct: 352 -----ALSMTVVGVFADH--TPAPMLIGIALCAIAAMLT 383