Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  156 bits (394), Expect = 1e-42
 Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 4/384 (1%)

Query: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           ++L AL AL  + +DM+LPA+P +A  F  +   +Q+TLT Y  G AI  L+ GPL D F
Sbjct: 13  MLLTALIALPRVTLDMHLPALPAMADYFHTSDSQLQLTLTLYALGSAISLLVSGPLTDRF 72

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139
           GRRPV+L G+FL+ +A    A  + +  L   R  Q   G    V+ + +VRD FDR++ 
Sbjct: 73  GRRPVLLVGLFLYVLATAACALADNLAVLIIARLFQALGGCCTTVIGRVMVRDYFDRDEQ 132

Query: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199
           AR +  +++ + ++P+ AP++G  +  +  WR +F +L    A++  +V  ++PET  PE
Sbjct: 133 ARLLGLISMAMAISPMAAPVLGSLMLPFINWRGLFVLLGGIGAVLCGVVYRRLPETRPPE 192

Query: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFG 259
                  +  +R Y  L ++   +    +    ++  F F++  + +    + +S   + 
Sbjct: 193 VAAAPP-QGLLRLYGQLLRDRYFLRYALAIGCVYSTYFPFISESSALLQRGFHLSATAYA 251

Query: 260 YLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWGTV-- 317
            +F   I   +    +  R V++     ++   + L L+  + L ++     G W  +  
Sbjct: 252 LVFAATISGYMLGANLFRRLVRRFDPDRLIAVGIGLNLLGSVTLALATTALPGEWLAIVL 311

Query: 318 PFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTETW 377
           P V++ V    TI +  +  +L  Y  +AGTAS L    +    ++       L    + 
Sbjct: 312 PMVLIMVSVGMTIPACQLS-VLQPYGAIAGTASGLFFFTQMLLTAVSSWATGLLSDGTSA 370

Query: 378 PMIFVMAACSVLSGAFYWTLGRKA 401
           P++ + +  SVL    +  L +KA
Sbjct: 371 PLVIMTSVASVLLVTSWLALQQKA 394