Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  218 bits (555), Expect = 2e-61
 Identities = 134/373 (35%), Positives = 203/373 (54%), Gaps = 5/373 (1%)

Query: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           IVLG L  + P AIDMYLPA+P I    G +  A+Q +L A+      GQL+ GPL+D F
Sbjct: 13  IVLGLLTTIGPFAIDMYLPALPAIGHALGADPHAMQASLMAFFIAVGAGQLVAGPLSDMF 72

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139
           GRR  M+ G+ LF +A++  A    +  L  +R  QG    A  V  +AVVRD++   + 
Sbjct: 73  GRRRPMVAGLVLFMLASIGCALAPDVGVLIALRFLQGLGACACMVTPRAVVRDLYTGPEA 132

Query: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199
           AR MS + +V +++P++AP++G  +A   GWR++F V+A      +AM+M  +PET    
Sbjct: 133 ARMMSLLLMVYSVSPILAPLVGSFVAESVGWRAVFGVVAALGLAGLAMLMAFLPETRPAA 192

Query: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFG 259
            R    FRS M  Y  L ++   M L F  +F+ +  F ++    FV    YGVSP  + 
Sbjct: 193 ARLSSNFRSAMAGYGLLLRDRRFMALAFMASFTVSAFFVYVANSPFVMSAHYGVSPRQYA 252

Query: 260 YLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWGTVPF 319
            LF LN V+++AL+  NG  V + G   +LR A+ +Q    IGL +   L  G+      
Sbjct: 253 LLFALNAVSLLALSQANGWLVTRFGIRRVLRTAVMVQ-AGSIGLLLVLTLA-GIDRLAVM 310

Query: 320 VVLFV---GTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTET 376
           VVL +   G    I   +  L +  +  +AGTAS+L GT+ F  G+++ A+VA     + 
Sbjct: 311 VVLLMIGYGVNGLIVPATFVLAMEGHASLAGTASALIGTMNFAGGALMVALVAPFANGKP 370

Query: 377 WPMIFVMAACSVL 389
            PM+  +AAC+ +
Sbjct: 371 LPMVAGIAACAAV 383