Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  210 bits (535), Expect = 5e-59
 Identities = 131/396 (33%), Positives = 194/396 (48%), Gaps = 12/396 (3%)

Query: 10  QTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQ 69
           Q P+ +L   ++L  LG L P +ID Y+PA   IA+  G     +Q TL+AY  GFA   
Sbjct: 10  QAPRWALA--VLLAVLGMLGPFSIDTYIPAFSGIAQSIGATPAEMQQTLSAYLFGFAFMN 67

Query: 70  LLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAV 129
           L HG L+DSFGRRPV+L G+ +F +A++  A +  I  L   R  QG +  A  VV +AV
Sbjct: 68  LFHGALSDSFGRRPVVLWGLAVFTLASLGCALSQNITQLVLFRGLQGLSTGAGIVVSRAV 127

Query: 130 VRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVM 189
           +RDMF   +  R MS VT+   +AP +AP++GG L +  GW ++FW L     ++     
Sbjct: 128 IRDMFPPAEAQRVMSQVTIYFGVAPAIAPIVGGFLFVHAGWHAVFWFLVAVGVVLFTANY 187

Query: 190 WKIPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYID 249
             +PETL  ++RQP + R  MR Y+DLC +P  + L F+    F GMF ++ A      D
Sbjct: 188 KLLPETLHKDHRQPFQVRHLMRGYWDLCSDPRFLLLAFASGVPFNGMFLYVLAAPAFLGD 247

Query: 250 IYGVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGI-----GLF 304
              + P  F + F L I  ++     +GR   K+     +R    + L+  +       F
Sbjct: 248 HLALQPQQFFWFFLLTIGGIMLGARASGRMAGKVAPKRQIRDGFLIMLITSVVNVVANTF 307

Query: 305 VSWVLDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSII 364
               + W LW   P  V   G    +   ++ L+L  +P   G ASSL   +      I+
Sbjct: 308 FQAHVAWALW---PLAVFAFGWALMVPVVTL-LVLDLHPERRGMASSLQAVIGSTANGIV 363

Query: 365 GAVVAALPGTETWPMIFV-MAACSVLSGAFYWTLGR 399
              VA L    T  +    MA  ++   A+ W  GR
Sbjct: 364 AGAVAPLVMHSTLALALTSMAMLAIGLVAWVWLHGR 399