Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  233 bits (594), Expect = 7e-66
 Identities = 130/381 (34%), Positives = 211/381 (55%), Gaps = 2/381 (0%)

Query: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           ++LG L A+ P AIDMYLPA+P I +    + GAVQ++LTA+      GQLL+GP++D  
Sbjct: 11  LLLGLLSAIGPFAIDMYLPALPAIGQSLHADIGAVQMSLTAFFLSLGAGQLLYGPISDMV 70

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139
           GR+P +  G+ LF +A++  A    I+ L  +R  QG   AA   + +AVVRD+    D 
Sbjct: 71  GRKPPLYAGLVLFALASVGCAVATDIQTLIVLRFVQGLGAAAGMAIPRAVVRDLHTGTDA 130

Query: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199
           AR MS + LV +++P++AP+ G  +  + GWR +FW + + A   +AM++  + ET    
Sbjct: 131 ARLMSLLMLVFSVSPILAPLAGSAVIAFAGWRGVFWAVTIAAVAGLAMMVKLLDETRPAS 190

Query: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFG 259
            R      S +  Y+ L ++   +GL+F G+F+ AG F +L   +FV ID YG+SP  + 
Sbjct: 191 ERVESSLGSALAAYWLLLRDRHYLGLVFIGSFAMAGFFTYLANSSFVMIDHYGLSPAMYS 250

Query: 260 YLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDW-GLWGTVP 318
             FG+N  A IA +   G   ++ G  N+++F +    +A + +F+ +      +W  + 
Sbjct: 251 VAFGVNAAAFIAASQFTGSLGERYGLVNLVKFGVVCCGVAMVAMFIYFATGGDNIWVLIV 310

Query: 319 FVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTETWP 378
              +  G +  +   +  L L  +  +AGTAS+L GTL+  TG++  AVV         P
Sbjct: 311 LYFIASGFMGLVIPTTGVLALEMHGAIAGTASALLGTLQMLTGALAMAVVGLFTDGRPLP 370

Query: 379 MIFVMAACSVLSGAFYW-TLG 398
           M+  MAA ++++    W TLG
Sbjct: 371 MVAGMAAGALIALVLTWLTLG 391