Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., MFS family multidrug efflux protein, similarity to bicyclomycin resistance protein Bcr from Sphingobium sp. HT1-2

 Score =  149 bits (377), Expect = 1e-40
 Identities = 104/364 (28%), Positives = 179/364 (49%), Gaps = 16/364 (4%)

Query: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGV-NAGAVQITLTAYTAGFAIGQLLHGPLADS 78
           ++   L A+  L+ID  LPA+P I RD  + N    Q+ ++ Y  G  +G LL G L+D 
Sbjct: 23  LLCACLMAMNALSIDPMLPALPDIGRDLHIANPNDRQLIISFYFMGLGVGSLLFGVLSDQ 82

Query: 79  FGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDRED 138
           FGR+ V+   + LF ++++  A  +    L   R + GF   A+ V+   ++RD F  + 
Sbjct: 83  FGRKKVLGGAMILFILSSIACAGAHSFTMLLIARTSAGFFAGASRVITVGIIRDRFKGDA 142

Query: 139 FARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSP 198
            AR MS +  V  L P++AP  G  +     WR IFWVLA+ A  ++  +  ++PETL P
Sbjct: 143 MARVMSLIFAVFMLIPVMAPTFGQAILWIAPWRWIFWVLAILATGILGWMAIRLPETLHP 202

Query: 199 ENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIY---GVSP 255
           +NR  +  R+ ++    + +   ++G + +     +G+  F+ +   ++ D++    + P
Sbjct: 203 DNRIRINPRTILQTVGTIFRTRSSIGYMLASGVVMSGLIGFILSVQQIFFDVFHAQKIFP 262

Query: 256 DGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALF-LQLMAGIGLFVSWVLDWGLW 314
             F  + G    +M   + +N R V + G+  + + AL    L+A + L V      G  
Sbjct: 263 LAFATIAG----SMGIGSLVNSRLVSRFGARRLSQSALIAFILIAAVHLAVILA---GQE 315

Query: 315 GTVPFVVLFVGTISTI---GSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVA-A 370
             V F+VL   T+ T+    SN   + +  + + AG ASS    L     S +G++V  A
Sbjct: 316 TIVTFMVLQAMTMMTVAFTASNFSAISMEPFSKGAGVASSFQAFLTTAVSSALGSLVGRA 375

Query: 371 LPGT 374
             GT
Sbjct: 376 FDGT 379