Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

 Score =  149 bits (376), Expect = 1e-40
 Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 10/400 (2%)

Query: 7   NTQQTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFA 66
           + Q+   ++  + ++L AL A++ L+ ++ LPA P +AR   V++  + +TL+++   FA
Sbjct: 15  DAQRANVLTAKVILLLAALAAISNLSTNIILPAFPEMARQLNVSSQELGLTLSSFFITFA 74

Query: 67  IGQLLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVI 126
             QLL GPLAD +GR+ +++ G+ +F +    +A    ++ L   R  Q     AAAV+ 
Sbjct: 75  FAQLLVGPLADRYGRKRLVVGGLMIFVVGTFWAANAATLDMLILGRVIQAIGVCAAAVLA 134

Query: 127 QAVVRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIA 186
           +A+ RD+++ E+ ARA+S   +    AP  +P+IG  L    GWR++F  + + A L+  
Sbjct: 135 RAIARDLYEGENLARALSLTMIAAATAPGFSPLIGSMLNTTLGWRALFIAVGMSAILIAL 194

Query: 187 MVMWKIPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFV 246
             +  I ETL    R      + +  Y  L  N + +    + +   +G+FA   A   +
Sbjct: 195 FYLRGIGETLPAHRRVTQSVPAILIAYGKLASNRLFILPALATSLLMSGLFASFAAAPSI 254

Query: 247 YIDIYGVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVS 306
            ++  G+S    G  F   +  + A      R   + GS  +    L     AG  L V 
Sbjct: 255 LMEGMGLSSLQVGLYFAATVFVVFAAGLAAPRLAHRWGSRAITLSGLATACTAGALLLVG 314

Query: 307 WVLDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGA 366
                  W ++  +VLF+  +         L ++ + + AG AS+L G L       IGA
Sbjct: 315 PSNPSLGWYSLS-MVLFLWGMGIANPLGTALTMTPFGKEAGLASALLGFLTMA----IGA 369

Query: 367 VVAALPGTETWPMIFVMAA-----CSVLSGAFYWTLGRKA 401
           V   +  T  +P I V+ A     C +    F W + RKA
Sbjct: 370 VSTWMVSTPKFPTIAVLGATQTSVCFLAMVLFAWYVKRKA 409