Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Bcr/CflA family multidrug resistance transporter from Pseudomonas putida KT2440

 Score =  233 bits (593), Expect = 9e-66
 Identities = 140/379 (36%), Positives = 212/379 (55%), Gaps = 6/379 (1%)

Query: 14  MSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHG 73
           M+L + ++LGAL A  PLAID YLPA P +A+ F  +   VQ TL AY  G +IGQL +G
Sbjct: 1   MNLRMVLILGALSAFGPLAIDFYLPAFPAMAQAFATDEKHVQATLAAYFLGLSIGQLAYG 60

Query: 74  PLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDM 133
           P+AD FGRR  ++ G+ LF +A++  A    ++ L   R  Q   G A  V+ +A+V D 
Sbjct: 61  PVADRFGRRKPLMFGVTLFTLASLACAYAPNLDTLVVARFIQALGGCAGMVLSRAIVSDK 120

Query: 134 FDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIP 193
            D    A+  S + LV+ LAP++APM+GG L    GW+SIF  L+LF+A  +  V   +P
Sbjct: 121 CDPVASAKVFSQLMLVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLP 180

Query: 194 ETLSPEN--RQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIY 251
           E+L PE+  RQPL     +R Y  L  + V +G   +G  + AGMFA++    FV+I +Y
Sbjct: 181 ESL-PEHIPRQPL--SGALRQYLRLLADRVFLGHALTGGIAIAGMFAYIAGSPFVFIKLY 237

Query: 252 GVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLF-VSWVLD 310
           GV  + +G+LFG N    I +  +N R + K G   +L  A++L L+AG+ L  V+ +  
Sbjct: 238 GVPAEHYGWLFGTNAAGFILVAQVNARLLAKRGPAFLLGRAVWLYLVAGLVLLGVAALRP 297

Query: 311 WGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAA 370
             LW  +  + + + ++  I  N+    +S     AG+AS+L G ++F   +   A+V  
Sbjct: 298 AQLWPLLVPLFICIASLGCIIPNASACAMSGQGARAGSASALMGCVQFSVAAGAAALVGL 357

Query: 371 LPGTETWPMIFVMAACSVL 389
           L      PM  V++ C  L
Sbjct: 358 LHDGSAVPMAIVISLCGAL 376