Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., multidrug effflux MFS transporter from Pseudomonas fluorescens SBW25

 Score =  234 bits (597), Expect = 3e-66
 Identities = 136/379 (35%), Positives = 209/379 (55%), Gaps = 4/379 (1%)

Query: 14  MSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHG 73
           M+L + ++LGAL A  PLAID YLP  P +A  F  +   +Q+TL  Y AG AIGQL++G
Sbjct: 1   MNLRIILILGALSAFAPLAIDFYLPGFPAMATAFATDEKHIQLTLAVYFAGLAIGQLIYG 60

Query: 74  PLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDM 133
           PLAD FGRR  +L G+ LF +A+   A    +E L   R  Q   G A  V+ +AVV D 
Sbjct: 61  PLADRFGRRGPLLSGVTLFTLASFACAFAPSLEWLIAARFVQALGGCAGMVISRAVVSDK 120

Query: 134 FDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIP 193
            D    A+  S + LV  LAP++AP+ GG +   +GW+SIF  L+LF+ +    V   +P
Sbjct: 121 CDPVGSAKVYSQLMLVTGLAPILAPLAGGLMVGVWGWQSIFLALSLFSVMAAIAVAVGLP 180

Query: 194 ETL-SPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYG 252
           ET  + + RQPL    ++R Y  L  + V +G   +G  S AGMFA++    FV+I +YG
Sbjct: 181 ETFPAHQPRQPL--SGSLRRYGALLSDRVYLGYALTGGISIAGMFAYIAGSPFVFIKLYG 238

Query: 253 VSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLF-VSWVLDW 311
           V  + +G+LFG N    I +  +N R + K G   +L   +++ L+A + L  ++ +   
Sbjct: 239 VPAEHYGWLFGSNAAGFILVAQVNARLLAKRGPAFLLSRTVWVYLLAALTLLGIAALRTD 298

Query: 312 GLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAAL 371
            LW  +  + + + ++  I  N+    +S     AG+AS+L G ++FG  +   ++V  L
Sbjct: 299 ALWPLLVPLFICIASLGCILPNTSACAMSGQGARAGSASALLGCIQFGVAAGAASLVGVL 358

Query: 372 PGTETWPMIFVMAACSVLS 390
                 PM  V++ C VL+
Sbjct: 359 HDGTAMPMAMVISLCGVLA 377