Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., MFS family multidrug transport protein, bicyclomycin resistance protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  363 bits (933), Expect = e-105
 Identities = 181/389 (46%), Positives = 255/389 (65%), Gaps = 2/389 (0%)

Query: 6   VNTQQTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGF 65
           V T+Q    S  +  +LG L  L PL+IDMYLPA+P I+  FGV AG+ Q+TL+ Y  GF
Sbjct: 1   VTTRQ--HSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSAQMTLSTYILGF 58

Query: 66  AIGQLLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVV 125
           A+GQL++GP+ADS GR+PV+L G  +F  AA+  A    I+ L  +R   G A AAA+VV
Sbjct: 59  ALGQLIYGPMADSLGRKPVILGGTLVFAAAAVACALAQTIDQLIVMRFFHGLAAAAASVV 118

Query: 126 IQAVVRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVI 185
           I A++RD++ +E+F+R MSFV LV T+APL+AP++GG + +W  W  IFW+LA+ A L  
Sbjct: 119 INALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILAIAAILAS 178

Query: 186 AMVMWKIPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAF 245
            M+   I ETL  E RQP   R+T+ N+  L ++   +  + +  FSFAGMF+FL+AG F
Sbjct: 179 VMIFALIKETLPVERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPF 238

Query: 246 VYIDIYGVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFV 305
           VYI+I  V P  FGY F LNIV +  +T IN RFV+++G+ NM R  L++Q    + +  
Sbjct: 239 VYIEINHVPPQDFGYYFALNIVFLFVMTIINSRFVRRVGALNMFRAGLWIQFAMAVWMVF 298

Query: 306 SWVLDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIG 365
           S ++  G W  V  V  FVG +S + SN+M ++L ++P MAGTASSLAGT RFG G+I+G
Sbjct: 299 SALMGIGFWALVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVG 358

Query: 366 AVVAALPGTETWPMIFVMAACSVLSGAFY 394
           A+++       WPMI+ +A C+  S  FY
Sbjct: 359 ALLSLATFNSAWPMIWSIALCAACSILFY 387