Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., multidrug effflux MFS transporter from Erwinia tracheiphila SCR3

 Score =  162 bits (409), Expect = 2e-44
 Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 12/388 (3%)

Query: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79
           ++L  L  L PL +D+YLP +P IA         +Q T+  +     +GQLL GPL D  
Sbjct: 6   LLLLGLVLLAPLGVDLYLPTLPEIALGLNTPVNKIQTTIPLFLLVIGLGQLLAGPLVDKL 65

Query: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139
           GR+PV L G+ L+ + ++++A+          R  QG A    AVV  + VRD  D ++ 
Sbjct: 66  GRKPVALAGLVLYLLGSILAASAADWPQFLLARLIQGAAVCCTAVVAFSGVRDRLDGDEA 125

Query: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199
           A+A  F+   + + P +APM+GG LA  FGWR+ FW LA +  L+  +V+  +PET S +
Sbjct: 126 AKAYGFLNGALNIVPALAPMLGGFLADDFGWRAPFWFLAGYGGLIGVLVIAFLPETRSAD 185

Query: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFG 259
                      R Y+ + +    +   F+ A +   +  +++    V +    ++   F 
Sbjct: 186 TLAVKGI--PFRQYYAILRQSRFLAFAFANAGAMGMVLTYVSLAPQVLMTEGKLNALQFS 243

Query: 260 YLFGLNIVAMIALTTINGRFVKKIG-----SHNMLRFAL-FLQLMAGIGLFV-SWVLDWG 312
              G N   ++ ++    + ++K+G     +   L  AL  L LM G+ L    W   W 
Sbjct: 244 IAVGANGFWIMLVSVAVNKIIRKLGRPFCLAAGSLAMALGALTLMGGVWLLPGDWQDHWT 303

Query: 313 LWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALP 372
           L+   P  +   G   T+G  S    L  Y + AG AS+LAG ++   GS  G ++  LP
Sbjct: 304 LY-IFPVAISLAGLAFTVGPAS-SYALEPYQQQAGVASALAGFIQMAGGSSAGLLLMVLP 361

Query: 373 GTETWPMIFVMAACSVLSGAFYWTLGRK 400
             E   +  +M   ++LSG   W   +K
Sbjct: 362 LAEKTALSLMMIMGTILSG-LAWMYSKK 388