Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., multidrug efflux MFS transporter Bcr from Escherichia coli ECRC62

 Score =  374 bits (960), Expect = e-108
 Identities = 186/388 (47%), Positives = 261/388 (67%), Gaps = 2/388 (0%)

Query: 6   VNTQQTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGF 65
           V T+Q    S  +  +LG L  L PL+IDMYLPA+P I+  FGV AG+ Q+TL+ Y  GF
Sbjct: 1   VTTRQ--HSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGF 58

Query: 66  AIGQLLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVV 125
           A+GQL++GP+ADSFGR+PV+L G  +F  AA+  A  N I+ L  +R   G A AAA+VV
Sbjct: 59  ALGQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVV 118

Query: 126 IQAVVRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVI 185
           I A++RD++ +E+F+R MSFV LV T+APL+AP++GG + +W  W  IFW+LAL A L  
Sbjct: 119 INALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILAS 178

Query: 186 AMVMWKIPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAF 245
           AM+ + I ETL PE RQP   R+T+ N+  L ++   +  + +  FSFAGMF+FL+AG F
Sbjct: 179 AMIFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPF 238

Query: 246 VYIDIYGVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFV 305
           VYI+I  V+P+ FGY F LNIV +  +T  N RFV++IG+ NM R  L++Q +    + +
Sbjct: 239 VYIEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVI 298

Query: 306 SWVLDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIG 365
           S +L  G W  V  V  FVG +S + SN+M ++L ++P MAGTASSLAGT RFG G+I+G
Sbjct: 299 SALLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVG 358

Query: 366 AVVAALPGTETWPMIFVMAACSVLSGAF 393
           A+++       WPMI+ +A C+  S  F
Sbjct: 359 ALLSLATFNSAWPMIWSIAFCASSSILF 386