Pairwise Alignments

Query, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., Bcr/CflA family drug resistance efflux transporter from Escherichia coli ECRC100

 Score =  178 bits (451), Expect = 3e-49
 Identities = 114/380 (30%), Positives = 197/380 (51%), Gaps = 9/380 (2%)

Query: 13  QMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLH 72
           ++SL   ++LG L  + P+  D+YLPA+P ++          Q+TLTA   G  +GQLL 
Sbjct: 3   RVSLSWALILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLF 62

Query: 73  GPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRD 132
           GPL+D  GR+  ++  + LF +++++ ATTN I  L   R  QG AGA  +V+ +++ RD
Sbjct: 63  GPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARD 122

Query: 133 MFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKI 192
            +      +  + +  V  LAP+++P++GG++   F WR++FWV+A  + +++   +  I
Sbjct: 123 KYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFI 182

Query: 193 PETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYG 252
            ETL PEN++      T R+   + +N   M      +F  AG+FA++ + +FV    +G
Sbjct: 183 NETL-PENKRGSSLLLTGRS---VVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFG 238

Query: 253 VSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLM-AGIGLFVSWV-LD 310
            SP  F  +FGLN + +I  + I  R  ++I +  +LR  L   ++ A + +  +W  L 
Sbjct: 239 FSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLP 298

Query: 311 WGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAA 370
                 + F + F   I T+G      + +   + +GTAS+L G   F  G  I A ++ 
Sbjct: 299 IPALVALFFTIAFCSGIGTVGGAE--AMSAVGTQESGTASALMGMSMFVFGG-IAAPLSG 355

Query: 371 LPGTETWPMIFVMAACSVLS 390
             G     M   +  C  L+
Sbjct: 356 FGGETLLKMSLAITVCYTLA 375