Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., DNA damage-inducible protein F from Xanthobacter sp. DMC5

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 99/375 (26%), Positives = 168/375 (44%), Gaps = 25/375 (6%)

Query: 8   LSHMRGDF-FRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTT 66
           L+ + GD   RR++AIALP+TL ++     G+VD  ++G+LG A +      A   F   
Sbjct: 3   LAAVSGDVTHRRVLAIALPMTLAHLTTPLLGVVDAAVVGRLGSASMLGGVALAAVIFDML 62

Query: 67  IMLVGVTTGGAL-LTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLT 125
             + G    G + L AQ  G  D    R   A   LV+       VLL        +SL 
Sbjct: 63  FWVFGFLRMGTVGLAAQAVGRRDAVEERAVLARGLLVAGALGLLIVLLRTPIESAALSLA 122

Query: 126 TDSEQVNALGSQYLIITSFTM-FAVA--CVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVL 182
             S++VN     Y  +  F   F +A   V    VGL    +        GI  + N+VL
Sbjct: 123 GASDEVNVAVRDYYAVRIFAAPFTLANYVVLGWLVGLGRTGR--ALALQVGINFL-NMVL 179

Query: 183 NWILIFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAV-IDWP 241
           +  L+ G  G+   G     +   ++GA+    L + L G +  +A      KAV +D  
Sbjct: 180 SAALVLGA-GWGVAGSAAGTLVAEIAGAVAGLILCAALLGGRLGVA------KAVLLDKA 232

Query: 242 KISRFLRLSLPTTFNFLIWAAGL---FTYHAIMG-QTGVQGLAALSVMTPVESISLSLLI 297
           ++S+ + L+     + +I  A L   F++ A  G + G   LAA +++  +  ++   L 
Sbjct: 233 RLSQTVMLNR----DIMIRTAALMFAFSFFAAQGARAGDVTLAANAILQNMVMVAAYFLD 288

Query: 298 GMSTAAAVLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTALTP 357
           G +TAA  + G+ +GA+  ++ +   + ++     V  V+A  +YLV  P +    + +P
Sbjct: 289 GFATAAEQICGSAVGARR-KSDFSAGVRLSIVWGFVFAVLAGVVYLVTGPAIVDAMSTSP 347

Query: 358 ETRELSEKFMLILCL 372
           E R  +  ++L   L
Sbjct: 348 EVRAEARIYLLYAAL 362