Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 85/383 (22%), Positives = 160/383 (41%), Gaps = 29/383 (7%)

Query: 2   SVVSQVLSHMRGDFFRRLIAIALPITLQN------------IMFSSRGLVDVLMLGQLGE 49
           S V+Q++    G     L++  +P+ L+             +MF+   LVD   +  LG 
Sbjct: 7   SFVAQLMHDKHG-----LLSAPIPLVLRQMTVPMIFGLVAILMFN---LVDTFFISLLGT 58

Query: 50  AEIAAVGVAARATFVTTIMLVGVTTGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAFF 109
             +AA+      TF    + +G+  G +    +  G GD +     ++   L++      
Sbjct: 59  QALAAISYTFPVTFAVNCITMGIGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAA 118

Query: 110 TVLLFLFFPQQIMSLTTDSEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVST 169
              L L   + +  L   S ++  L  +Y+++   T+  +    +    +RA        
Sbjct: 119 ASTLGLLTIEPLFLLLGASHELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPA 178

Query: 170 FFSGIGIVSNVVLNWILIFGKFGFPAMGIQGAAIATVLS--GAIEIACLYSYLYGKKHLM 227
               +  + N  L+ +LIFG   FP +GIQGAAIA+  S  GA+ I  LY  +  +K L 
Sbjct: 179 KIMMLAGLINGALDPLLIFGYGPFPELGIQGAAIASAFSWLGAL-IGSLYLLIKREKLLA 237

Query: 228 AFGWQDIKAVIDWPKISRFLRLSLPTTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTP 287
                 ++   DW +I   L++  P   +  +          ++   G   +AA      
Sbjct: 238 IPSLPHLRD--DWQQI---LKIGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQR 292

Query: 288 VESISLSLLIGMSTAAAVLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIP 347
           +ESI + +L+ +++A    +   LGA+N    +         S+L  ++V I +  + IP
Sbjct: 293 IESILILVLMSLTSALTPFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIP 352

Query: 348 VLGAFTALTPETRELSEKFMLIL 370
            L A  +     R+L   ++L++
Sbjct: 353 -LAALFSQEQAVRDLLWHYLLVV 374



 Score = 47.8 bits (112), Expect = 8e-10
 Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 7/161 (4%)

Query: 8   LSHMRGDFFRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTI 67
           L H+R D+ ++++ I  P  L   M    G + ++ML   G A +AA G   R   +  +
Sbjct: 241 LPHLRDDW-QQILKIGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILIL 299

Query: 68  MLVGVTTGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQ---QIMSL 124
           +L+ +T+      AQ  GA   +    S A  +L   F   F +++F+        + +L
Sbjct: 300 VLMSLTSALTPFMAQNLGA---QNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAAL 356

Query: 125 TTDSEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKP 165
            +  + V  L   YL++   +      V  +   L A+H+P
Sbjct: 357 FSQEQAVRDLLWHYLLVVPVSYGFQGVVMMLVSALNALHQP 397