Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 93/404 (23%), Positives = 170/404 (42%), Gaps = 25/404 (6%)

Query: 19  LIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGGAL 78
           LI +A P+ + ++  +  G VD +M G +   ++AAV +AA     + +  VG+      
Sbjct: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVP 70

Query: 79  LTAQYWGAGDRKG----VRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNA- 133
           + AQ  GAG +      V +   L  LVS        ++ + F  Q +    D E+  A 
Sbjct: 71  VVAQLNGAGRQHKIPFEVHQGLILALLVS------VPIIAVLFQTQFIIRFMDVEEAMAT 124

Query: 134 --LGSQYLIITSFTMFAV-ACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGK 190
             +G  + +I +   + +   + S   G+ ++ KP +   F  IG++ N+ LNWI ++GK
Sbjct: 125 KTVGYMHAVIFAVPAYLLFQALRSFTDGM-SLTKPAMVIGF--IGLLLNIPLNWIFVYGK 181

Query: 191 FGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLS 250
           FG P +G  G  +AT +   I +  L  Y+   K L      +        ++ R  RL 
Sbjct: 182 FGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 241

Query: 251 LPTTFNFLIWAAGLFTYHAIM-GQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGN 309
            P     L +   LF   A++    G   +AA  V     S+     + +  A ++ VG+
Sbjct: 242 FPVA-AALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGH 300

Query: 310 QLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTALTPETRELSEKFMLI 369
           +LG ++ +     A       ++ G+  A    L+ +        L  E + +    M +
Sbjct: 301 KLGEQDTKGAAIAA----NVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQL 356

Query: 370 LCLGIVLRSFPMTAIV--GVLRAGGDVKFCLGQDIVAQWCIGIP 411
           L    + +      +V  G LR   D+     +  ++ W +G+P
Sbjct: 357 LLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLP 400