Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Multidrug export protein MepA from Pseudomonas sp. RS175

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 93/410 (22%), Positives = 177/410 (43%), Gaps = 14/410 (3%)

Query: 25  PITLQNIMFSSRGLVDVLMLGQ-LGEAEIAAVGVAARATFVTTIMLVGVTTGGALLTAQY 83
           P+ L N + S  G  + + +GQ LG   +AAV       F    +++G+  G  +L  Q 
Sbjct: 16  PMVLSNFLQSMSGTFNSIYIGQMLGTQALAAVSGMFPVLFFFIALVIGLGAGAGVLIGQA 75

Query: 84  WGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIM-SLTTDSEQVNALGSQYLIIT 142
           +GA +   V+     T L+         +L   F +  +  L T ++ ++   S   ++ 
Sbjct: 76  YGAQETGKVKAIAGATLLLGAIIGLVAAVLGSVFARDALHGLGTPADVLDDAVSYARVMM 135

Query: 143 SFTMFAVACV--SSMAVGLRAMHKPGVSTFFS-GIGIVSNVVLNWILIFGKFGFPAMGIQ 199
                 +  V  + +  G+     P ++   S G+G+V    L   LI G  G P MGIQ
Sbjct: 136 WILPILLVFVLFTQLLRGVSDTLSPLLALLVSTGVGLV----LTPALIRGWLGLPQMGIQ 191

Query: 200 GAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAV-IDWPKISRFLRLSLPTTFNFL 258
            AA+A ++     +A L   L  +++++A       A+ +D   +++ LR+ LPT    +
Sbjct: 192 SAAMAGLVGTTAAMAMLAWRLTRRQNVLAPDRALFAAMRLDRAILAKVLRIGLPTGLQMV 251

Query: 259 IWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLGAKNYEA 318
           + +       A++ + G +  AA   +T + +      + ++  A++L    +GA   E 
Sbjct: 252 VISLSELVILALVNRHGSEATAAYGAVTQIVNYVQFPALSIAITASILGAQAIGAGRLER 311

Query: 319 V-YYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTALTPETRELSEKFMLILCLGIVLR 377
           +      G+     L G +V +G YL+   +LG F    P  R  +E  + I+   +++ 
Sbjct: 312 LGPILRTGLIINLWLTGGLVLLG-YLLSHWLLGLFIT-DPTARVQAEHLLHIMLWSLLVF 369

Query: 378 SFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAALVLKVEPEWI 427
            F    + G++RAGG V   +   I     + +P A        ++  W+
Sbjct: 370 GF-QAIVGGIMRAGGTVLLPVTISIFCIVGVQVPAAYLLDAYFGLQGVWM 418